USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9BRA2 USC-OGP 2-DE database:  Q9BRA2 Q9BRA2 General information about the entry View entry in simple text format Entry name TXD17_HUMAN Primary accession number Q9BRA2 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Thioredoxin domain-containing protein 17; AltName: Full=14 kDa thioredoxin-related protein; Short=TRP14; AltName: Full=Protein 42-9-9; AltName: Full=Thioredoxin-like protein 5;. Gene name Name=TXNDC17 Synonyms=TXNL5 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1345: pI=5.27; Mw=14950 Cross-references UniProtKB/Swiss-Prot Q9BRA2; TXD17_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name TXD17_HUMAN Primary accession number Q9BRA2 Secondary accession number(s) A8K7E8 Sequence was last modified on  June 1, 2001 (version 1) Annotations were last modified on  March 15, 2017 (version 133) Name and origin of the protein Description RecName: Full=Thioredoxin domain-containing protein 17; AltName: Full=14 kDa thioredoxin-related protein; Short=TRP14; AltName: Full=Protein 42-9-9; AltName: Full=Thioredoxin-like protein 5; Gene name Name=TXNDC17 Synonyms=TXNL5 Encoded on Name=TXNDC17; Synonyms=TXNL5 Keywords 3D-structure; Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Disulfide bond; Redox-active center; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AJ344101; CAC51435.1; -; mRNA EMBL AK291963; BAF84652.1; -; mRNA EMBL CH471108; EAW90302.1; -; Genomic_DNA EMBL BC006405; AAH06405.1; -; mRNA CCDS CCDS11077.1; -; . RefSeq NP_116120.1; NM_032731.3; . UniGene Hs.408236; -; . PDB 1WOU; X-ray; 1.80 A; A=1-123 PDBsum 1WOU; -; . ProteinModelPortal Q9BRA2; -; . SMR Q9BRA2; -; . BioGrid 124277; 31; . IntAct Q9BRA2; 6; . STRING 9606.ENSP00000250101; -; . iPTMnet Q9BRA2; -; . PhosphoSitePlus Q9BRA2; -; . BioMuta TXNDC17; -; . DMDM 74732856; -; . REPRODUCTION-2DPAGE IPI00646689; -; . EPD Q9BRA2; -; . MaxQB Q9BRA2; -; . PaxDb Q9BRA2; -; . PeptideAtlas Q9BRA2; -; . PRIDE Q9BRA2; -; . TopDownProteomics Q9BRA2; -; . Ensembl ENST00000250101; ENSP00000250101; ENSG00000129235; . GeneID 84817; -; . KEGG hsa:84817; -; . UCSC uc002gdf.5; human; . CTD 84817; -; . DisGeNET 84817; -; . GeneCards TXNDC17; -; . HGNC HGNC:28218; TXNDC17; . HPA HPA022931; -; . neXtProt NX_Q9BRA2; -; . OpenTargets ENSG00000129235; -; . PharmGKB PA162407489; -; . eggNOG KOG3425; Eukaryota; . eggNOG ENOG4111Q2V; LUCA; . GeneTree ENSGT00390000012195; -; . HOGENOM HOG000241811; -; . HOVERGEN HBG079628; -; . InParanoid Q9BRA2; -; . OMA IMVVTHN; -; . OrthoDB EOG091G0VBT; -; . PhylomeDB Q9BRA2; -; . TreeFam TF313854; -; . EvolutionaryTrace Q9BRA2; -; . GenomeRNAi 84817; -; . PRO PR:Q9BRA2; -; . Proteomes UP000005640; Chromosome 17; . Bgee ENSG00000129235; -; . CleanEx HS_TXNDC17; -; . ExpressionAtlas Q9BRA2; baseline and differential; . Genevisible Q9BRA2; HS; . GO GO:0005829; C:cytosol; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0004601; F:peroxidase activity; IDA:UniProtKB; . GO GO:0047134; F:protein-disulfide reductase activity; IDA:UniProtKB; . GO GO:0033209; P:tumor necrosis factor-mediated signaling pathway; IMP:UniProtKB; . Gene3D 3.40.30.10; -; 1; . InterPro IPR010357; DUF953_thioredox; . InterPro IPR012336; Thioredoxin-like_fold; . PANTHER PTHR12452; PTHR12452; 1; . Pfam PF06110; DUF953; 1; . SUPFAM SSF52833; SSF52833; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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